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Sessions for Friday, July 20th, 2018
MorningO1
AfternoonFT01RG1
Sessions for Saturday, July 21st, 2018
MorningO2BR02RG2FT02FT05FT06BK01FT07
AfternoonEX0BK02M01
EveningM02
Sessions for Sunday, July 22nd, 2018
MorningO3BR01BR03RG3FT08FT09M03SP1W01W02W03W04R11M04BK03EX1W05W06W07M05M06
AfternoonD5PP1FT11M07W08W09W10W11W12W13M08BK04M09M11M12M13M14BQ4M41R10
EveningM15R1M10S1EX2MX1
Sessions for Monday, July 23rd, 2018
MorningO4BR04BR05BR06BR08M16PP2RG4123456C01C02SY178BR07BK05EX3S2
AfternoonD1L1L2L3M1710111213149C03C04M18SY2BK0615S8M19R2P
EveningMX2D6LT2R3BQ1MX3
Sessions for Tuesday, July 24th, 2018
MorningO5BR09BR10M21PP3R4RG5161718192021C05SY322C0623EX4M22BK0724C07aM23S3
AfternoonM24M25M26M27S425262728293031C07bC08SY432BK0833S534D3R5M28M29M30R6R7BQ2M31
EveningMX4BQ3
Sessions for Wednesday, July 25th, 2018
MorningO6BR11BR12BR13BR14M32PP4RG63536373839C09C10D4SY540C11aEX5BK09D241S6
AfternoonL4M33M34M35424344454647C12C13L6SY6C11bBK10LTR8M36S7
EveningM37R9
Sessions for Thursday, July 26th, 2018
MorningO7FT12M38W15

Presentations for Session 11

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OrderDate/TimeTitleSection/TopicTypeAuthorsKeywords
Monday, July 23rd
1:30 pm to 5:15 pm · 114/Mayo Civic Center
Session 11: Contributed Papers: Phylogenomics: Phylogenomics II
Presiding: Sarah Mathews, CSIRO National Research Collections Australia; Mark Fishbein, Oklahoma State University
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11001July 23rd 1:30 pmAssessing the reticulate history of white oaks (Quercus) using hundreds of nuclear loci
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PhylogenomicsOral PaperCrowl, Andrew; McVay, John; Hipp, Andrew; Manos, Paul.Quercus
Hybridization
Oaks
SNAQ
Introgression
gene flow
HybSeq
11002July 23rd 1:45 pmEmbracing gene tree conflict to inform species relationships: An example in the clade Caryophyllales
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PhylogenomicsOral PaperWalker, Joseph; Brown, Joseph; Smith, Stephen.Phylogenomics
gene tree conflict
Caryophyllales
supermatrix
Coalescent
11003July 23rd 2:00 pmDifferential Decay of an Ancient Mitochondrial Insertion in the Plastid Genomes of Paspalum (Poaceae)
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PhylogenomicsOral PaperBurke, Sean; Ungerer, Mark; Duvall, M.Poaceae
Paspalum
mtDNA
ptDNA
molecular evolution
inserts
Next generation sequencing
Grasses
11004July 23rd 2:15 pmPlastome phylogenomics and characterization of rare genomic changes in plastome groups 1 and 2 Poeae (Pooideae; Poaceae)
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PhylogenomicsOral PaperOrton, Lauren; Burke, Sean; Duvall, M.chloroplast
plastome
Plastid
Poeae
Pooideae
Poaceae
Phylogenomics
11005July 23rd 2:30 pmDetecting Hybridization in Hawaiian Cyrtandra (Gesneriaceae) Using Genome-wide Data
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PhylogenomicsOral PaperKleinkopf, Jospeh; Wagner, Warren; Roalson, Eric.Cyrtandra
Gesneriaceae
Hawaii
Hyb-Seq
Hybridization
11006July 23rd 2:45 pmBreak
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Phylogenomics
11007July 23rd 3:45 pmSeed plant phylogeny inferred from integrated analyses of morphological and molecular data
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PhylogenomicsOral PaperMathews, Sarah; Campbell, Christopher; Cronn, Richard; Gernandt, David; Graham, Sean; Hansen, Kimberly; Holman, Garth; G.Kelch, Dean; Lam, Vivienne; Li, Jianhua; Liston, Aaron; Little, Damon; Mapes, Gene; Mei, Wenbin; Moore, Abigail; Nagalingum, Nathalie; Parks, Matthew; Peery, Rhiannon; Rai, Hardeep; Raubeson, Linda; Ross, Gregory; Rothwell, Gar; Ruhsam, Markus; Ryberg, Patricia E.; Schwarzbach, Andrea; Stevenson, Dennis; Stockey, Ruth; Yang, Yong.seed plant
phylogeny
fossils
molecules
morphology
11008July 23rd 4:00 pmPhylogenomics of Nyssa from single copy genes and Fluidgim sequencing – insights into biogeography and character evolution
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PhylogenomicsOral PaperZhou, Wenbin; Xiang, Jenny; Wen, Jun.eastern Asia-eastern North American disjunction
Nyssa
Fluidigm sequencing
Ancestral character estimation
Biogeography
11009July 23rd 4:15 pmMilkweed Phylogenomics: Assessing Incomplete Lineage Sorting and Intergenomic Discordance
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PhylogenomicsOral PaperFishbein, Mark; Straub, Shannon; Boutte, Julien; Weitemeier, Kevin A.; Cronn, Richard; Liston, Aaron.Phylogenomics
Phylogenetics
nuclear genes
target enrichment
HybSeq
Incomplete Lineage Sorting
milkweed
Asclepias
Apocynaceae
11010July 23rd 4:30 pmAllele phasing has minimal impact on phylogenetic reconstruction from targeted nuclear gene sequences in a case study of Artocarpus
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PhylogenomicsOral PaperKates, Heather; Johnson, Matthew; Gardner, Elliot; Zerega, Nyree; Wickett, Norman.Targeted Sequence Capture
Hyb-Seq
heterozygosity
allelic sequence data
Phylogenomics methods
11011July 23rd 4:45 pmEvolution and Historical Biogeography of Asteraceae using Hyb-Seq Data
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PhylogenomicsOral PaperMandel, Jennifer; Siniscalchi, Carolina; Thapa, Ramhari; Dikow, Rebecca; Watson, Linda E; Funk, Vicki.Compositae
Phylogenomics
Biogeography
Hyb-Seq
Sunflower

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