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Sessions for Friday, July 20th, 2018
MorningO1
AfternoonFT01RG1
Sessions for Saturday, July 21st, 2018
MorningO2BR02RG2FT02FT05FT06BK01FT07
AfternoonEX0BK02M01
EveningM02
Sessions for Sunday, July 22nd, 2018
MorningO3BR01BR03RG3FT08FT09M03SP1W01W02W03W04R11M04BK03EX1W05W06W07M05M06
AfternoonD5PP1FT11M07W08W09W10W11W12W13M08BK04M09M11M12M13M14BQ4M41R10
EveningM15R1M10S1EX2MX1
Sessions for Monday, July 23rd, 2018
MorningO4BR04BR05BR06BR08M16PP2RG4123456C01C02SY178BR07BK05EX3S2
AfternoonD1L1L2L3M1710111213149C03C04M18SY2BK0615S8M19R2P
EveningMX2D6LT2R3BQ1MX3
Sessions for Tuesday, July 24th, 2018
MorningO5BR09BR10M21PP3R4RG5161718192021C05SY322C0623EX4M22BK0724C07aM23S3
AfternoonM24M25M26M27S425262728293031C07bC08SY432BK0833S534D3R5M28M29M30R6R7BQ2M31
EveningMX4BQ3
Sessions for Wednesday, July 25th, 2018
MorningO6BR11BR12BR13BR14M32PP4RG63536373839C09C10D4SY540C11aEX5BK09D241S6
AfternoonL4M33M34M35424344454647C12C13L6SY6C11bBK10LTR8M36S7
EveningM37R9
Sessions for Thursday, July 26th, 2018
MorningO7FT12M38W15

Presentations for Session 1

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OrderDate/TimeTitleSection/TopicTypeAuthorsKeywords
Monday, July 23rd
8:00 am to 11:30 am · 114/Mayo Civic Center
Session 1: Contributed Papers: Phylogenomics: Phylogenomics I
Presiding: Liming Cai, Harvard University
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1001July 23rd 8:00 amComparison of taxon-specific versus general locus sets for targeted sequence capture in plant phylogenomics
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PhylogenomicsOral PaperChau, John; Olmstead, Richard.hybrid enrichment
single-copy nuclear genes
PPR genes
Buddleja
Scrophulariaceae
Lamiales
1002July 23rd 8:15 amElucidating the Multiple Independent Whole Genomes Duplication Events in the Brassicales
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PhylogenomicsOral PaperBrose, Julia; Mabry, Makenzie; Dismukes, Wade; Beric, Aleksandra; Washburn, Jacob; Edger, Patrick; Hall, Jocelyn; McKain, Michael; Al-Shehbaz, Ihsan; Harkess, Alex; Schranz, M. Eric; Conant, Gavin; Pires, Joseph Chris.Brassicales
whole chloroplast
Phylogenomics
1003July 23rd 8:30 amNested phylogenetic conflicts and deep phylogenomics in plants
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PhylogenomicsOral PaperSmith, Stephen; Brown, Joseph; Walker, Joseph.Phylogenomics
land plants
Phylogenetics
heterogeneity
conflict
1004July 23rd 8:45 amExtensive gene tree discordance in Malpighiales not explained by incomplete lineage sorting and gene tree estimation error
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PhylogenomicsOral PaperCai, Liming; Xi, Zhenxiang; Lemmon, Emily; Lemmon, Alan; Mast, Austin; Buddenhagen, Christopher; Liu, Liang; Davis, Charles.Anchored hybrid enrichment
Subsampling
Gene tree-species tree conflict
Hybridization
Rapid radiation
Coalescent method
1005July 23rd 9:00 amEvolution of Portulacineae marked by gene tree conflict and gene family expansion associated with adaptation to harsh environments
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PhylogenomicsOral PaperWang, Ning; Yang, Ya; Moore, Michael J.; Brockington, Samuel; Walker, Joseph; Brown, Joseph; Eggli, Urs; Majure, Lucas; Smith, Stephen.gene tree conflict
gene duplication
molecular evolution
paleopolyploidy
Portulacineae
stress adaptation
1006July 23rd 9:15 amMassive polyploidization but no obvious role for polyploids in the radiation of southern African Oxalis L.: insights from phylogenomics and cytogenetics
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PhylogenomicsOral PaperSchmickl, Roswitha; Oberlander, Kenneth; Zeisek, Vojtěch; Liston, Aaron; Schneeweiss, Hanna; Záveská, Eliška; Emshwiller, Eve; Dreyer, Leanne; Suda, Jan.radiation
whole genome duplication
Hyb-Seq
Greater Cape Floristic Region
1007July 23rd 9:30 amBreak
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Phylogenomics
1008July 23rd 10:15 amEvolution of function and structure in the leucine-rich repeat gene family in flowering plants
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PhylogenomicsOral PaperGallagher, Joseph; Man, Jarrett; Bartlett, Madelaine.leucine-rich repeat
molecular evolution
Phylogenomics
1009July 23rd 10:30 amPhylogenomics of Aesculus L. (Sapindaceae) inferred from RAD-seq data – insights into biogeography and evolution of the genus
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PhylogenomicsOral PaperDu, Zhiyuan; Xiang, Jenny; Harris, AJ.Aesculus
RAD-seq
intercontinental disjunction
Niche Evolution
Biogeography
1010July 23rd 10:45 amOrigin(s) of a hybrid: History of allopolyploid Brassica napus using genome-wide data
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PhylogenomicsOral PaperAn, Hong; Gaynor, Michelle; Gebken, Sarah; Qi, Xinshuai; Barker, Michael; Pires, Joseph Chris.Brassica
Phylogenomics
1011July 23rd 11:00 amCharacterizing gene-tree conflict and systematic error in plastome-inferred phylogenies
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PhylogenomicsOral PaperWalker, Joseph; Stull, Gregory; Walker-Hale, Nathanael; Vargas, Oscar M; Larson, Drew.Chloroplast genome
plastome
angiosperms
Genomic conflict
gene tree conflict
Systematic error
Phylogenomics
rpoC2
1012July 23rd 11:15 amREPHINE: REcursive PHylogenetic INferencE
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PhylogenomicsOral PaperMiller, Joe.Phylogenetics
DNA alignments

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